When The Coon arrived with The New Kid (now going under the superhero alias of Buttlord, Doctor Timothy contacted the former telepathically, telling him that his franchise would not succeed. Unfortunately, this only served to anger Coon and Friends, forcing Doctor Timothy to teleport away when The Coon tried to attack him. While their respective teams battled in the street, The Coon chased Doctor Timothy, stealing his phone before being mind-raped into submission.
Doctor Timothy appeared alongside the rest of the Freedom Pals when they confronted Coon and Friends in the playground, demanding the return of his phone. He used his telepathy to call the Coon's bluff about their connection with Netflix before joining Toolshed, Tupperware, and Mysterion in battle; despite summoning brainwashed Kindergartners to aid him, he and his allies were defeated.
Later, when Professor Chaos escorted The New Kid to infiltrate the Freedom Pals' base, only greeted by distrust and animosity of most of the Freedom Pals, he showed up and gave the New Kid a chance to prove their intentions are pure, without even reading the New Kid's mind. After the mission to the Shady Acres, Doctor Timothy gladly accepted The New Kid as a part of the Freedom Pals.
After everyone got out of the police station on the third night, with Coon and Friends being joyful and the Freedom Pals left shocked, Doctor Timothy came again and revealed that Freedom Pals were tricked all along. With the knowledge that the New Kid was playing on him, he brainwashed four of the Coon and Friends (the other two were later under his control as well), ordering them to defeat (presumably to destroy) the New Kid as a punishment. However, the objective was unsuccessful as Doctor Timothy was defeated again. With Call Girl and Professor Chaos fighting on the side of the New Kid, all the Coon Friends eventually came to their senses, and united to attack the Doctor.
After the Doctor's defeat, the Freedom Pals took everyone to the Freedom Pals' base, revealing the true intention of Doctor Timothy, as he wanted to create a franchise plan that involves everybody to end the civil war. Blaming all the attack and the deceit on the New Kid, Coon and Friends joined forces with the Freedom Pals, putting an end to the civil war.
The next day, Doctor Timothy's franchise plan was destroyed, leaving him in shock and disbelief. Right after the incident, a message came that The New Kid's parents were kidnapped, knowing this, Doctor Timothy made a promise to the New Kid that Freedom Pals will never stop until The New Kid's parents are rescued. He also used his mind powers to unlock all the classes for The New Kid.
Doctor Timothy also took part in the tour to the genetics lab to find The New Kid's parents. However, when the lab's security system got shut down, he started thinking that maybe all the problems is a result of his inadequacy to lay emphasis on The Coon. After Mitch Conner revealed his plan to everyone, like everyone else, the Doctor conveniently ignored the original mission to rescue The New Kid's parents along with his promise to The New Kid, and started focusing on stopping Mitch Conner.
In the far future where Christmas stays forever, Doctor Timothy agreed to the suggestion made by Toolshed to pray to Jesus for help.
In the final battle with the two Mitch Connors, Doctor Timothy activates his psychic powers to 'cleanse' the battlefield in order to terminate the endless cheating on both sides.
- 提米低语者：Ultimate ability. Doctor Timothy, in full recruitment mode, damages and Charms multiple foes from range.
- 灵魂尖啸：This blast of pure psychic energy damages and knocks back all enemies in a row.
- 思想强暴：Doctor Timothy rapes an enemy's mind, Charming the foe and convincing them to temporarily change allegiance.
- 灵智炸弹：The Doctor stupefies his enemies. All foes in the affected zone are Confused. (Damages and Confuses enemies. Hits three squares in a row ahead of him.)
- 幼儿园生出击： Summons four Kindergartener Swarmers on the left to assist him. Only used in his first battle in Civil War 2, replacing Brain Bomb.